NEWS
glcdp 1.1.0
- Added
glc_collection_plan() to find compatible file groups before reading
measurement data. Plans include clear reasons when groups cannot be combined.
- Collection plans include study, contributor, dataset, participant, device,
instrument, and variable metadata for filtering. Planning only loads declared
core metadata at the verified package revision.
- Added
glc_collection_refine() to update a selection from an existing plan
without downloading or reloading anything.
- Compatible unordered factors can now be combined using a consistent set of
levels. Conflicting values, labels, descriptions, or ordering still prevent
collection.
glc_read() preserves the declarations needed for these checks.
- File groups from different devices can now be collected within one dataset.
Device information remains linked through
file_group_id.
- The Explorer, collection planner, and
glc_collect() now use the same
compatibility rules. Actual data are still checked when read and collected.
- Collection plans use format 1.2.0 and version 2 identifiers. Rebuild plans
saved with earlier development versions.
- Updated the default registry URL to the official Global Light Commons
endpoint and refreshed the Posit Connect deployment manifest.
- Added documentation and tests for planning, refinement, and factor handling,
and updated the live Schema 3 integration test expectations.
glcdp 1.0.0 (2026-08-06)
- Promoted schema 3.0.2 to the current default and primary stable import
contract, while retaining 3.0.0 and 3.0.1 as compatible stable
predecessors. Schema 3.0.2 is a corrective patch that requires
datasheet_channel to contain at least one entry when present; its
metadata-driven data import contract is unchanged. Schema 1.0.0 and 2.0.0
remain available as barebones legacy compatibility paths.
- Declared variable types and factor levels in schema-declared order now drive
import, including boolean
true/false and 1/0 representations.
Variable and factor-level descriptions are exposed in glc_variables(),
and per-file encodings declared by a file group are applied to the
corresponding files. glc_collect() rejects groups whose factor labels or
level order differ.
- Added a scheduled and manually dispatchable live schema 3.0.2 integration
check against the validated IZTECH package. It covers exact Explorer
inventories, metadata resources, factor and integer imports, selection,
download, and local reopen behavior.
- Metadata summaries now load tabular core resources such as
participants.csv, and LightLogR standardization safely reconciles
schema-declared source Id, Datetime, and file.name columns.
- Collection-datetime groups can now be combined across participants when
their formats agree; the participant-specific timestamp values are no
longer mistaken for different datetime schemas in either
glc_collect() or
the Explorer.
- Remote file metadata, full inventories, and package summaries are now cached
for immutable revisions. Small Git blobs are inspected concurrently for LFS
pointers, and
glc_summary() counts variables directly from the normalized
model instead of constructing the complete variable inventory.
glc_explore() now accepts IDE-provided Shiny viewer functions through
shiny.launch.browser. A central, accessible status banner describes
registry, package, summary, contents, selection, and preview loading work.
Package contents can be loaded directly from the completed summary without
leaving that view; completion offers a direct handoff to the loaded contents,
and failures can be retried in place.
- Explorer file groups can now be discovered by device, wearing position and
type, modality, role, data state, contained source variables, and semantic
terms in both Package contents and Select & hand off. These field filters
narrow participant-specific repeated groups before exact group selection.
The complete filtered result, rather than only its current page, can be
transferred from Package contents into a preseeded handoff.
- Numeric participant characteristics use inclusive range sliders. The
metadata hierarchy loads complete records incrementally, keeps table paging
independent, labels participant-characteristic records with participant and
characteristic names, and presents singular flat child objects inline
without hiding genuinely repeatable record collections. Repeated leaf
fields, such as study-group inclusion, exclusion, and dataset lists, are
folded with record counts; compact label/value grids remove the former wide
spacing. Dense records show an in-place loading message and progress
indicator while their values render. Metadata results are no longer
truncated after 500 values.
- Large Explorer inventories now remain responsive by paging File groups,
Variables, and included handoff groups at 100 rows, abbreviating long
selection-summary lists, deferring metadata hierarchy indexing until its
view is opened, and serving large selectize choice sets from the Shiny
session. A page-level busy pulse and output spinners provide immediate
feedback during remaining reactive work.
- Package contents now opens in the order Metadata, Datasets, Variables, and
File groups. Metadata field labels stay on one aligned line, record nodes use
a domain-neutral icon, and discovery sidebars omit the redundant Filters
heading. File-group compatibility is summarized by a compact green or orange
action above the filters; incompatible selections open focused refinement
guidance instead of occupying the result card. The completed package-summary
action opens Package contents directly on Metadata.
- Explorer handoffs can now filter on schema semantic terms as well as source
variable names. Variable filters automatically retain a collectable subset
of file groups and report included and excluded counts instead of emitting
one incompatibility error for every excluded group. The former Recommended
action is now Primary, reflecting schema-declared primary variables and
falling back to all variables when none are declared.
- Select & hand off now starts with an explicit package-and-metadata or
measurement-data choice. Metadata-only scripts pin the validated revision,
download selected core resources, and load no measurement files. Data
handoffs now use one full-width, seven-step wizard whose visible tabs cover
package/metadata, file groups/datasets, participants/devices,
variables/terms/rows, review, preview, and R export. Each step separates
controls from a stable information column, fills the available window
height, and uses equal-width Back/Continue navigation. Large dataset and
exact-group selections scroll inside bounded inputs instead of stretching
the card. Downstream filters temporarily narrow rather than erase the
dataset and exact-file-group baseline selected in Step 2. Preview reads two
files by default, with independent file and row limits, while an optional
maximum rows per file is retained in the exported
glc_read() call.
Review now presents its selection and included-group tables as an accordion,
with the selection open initially. Preview results sit directly below their
build action, export scripts sit directly below their download action, and
step content scrolls independently so Back/Continue controls remain visible.
Generated data scripts clean up their temporary handoff settings, leaving
only local_package and glc_data.
glcdp 0.9.3
- Added
extract_metadata() and add_metadata() to select requested metadata
by imported-data identifiers and optionally join it onto every observation.
Their default file_group_id link traverses from each file group to its
dataset, participant, study, and device; dataset-level extraction remains
available with by = "Id". Extracted summaries retain the input dataset's
grouping and grouping columns.
- LightLogR-standardized
glc_collect() output now exposes file_group_id and
rejects contradictory group relationships or multiple device links within a
dataset.
- Added
glc_explore(), a Shiny application for browsing the registry,
inspecting package contents and hierarchical metadata, filtering datasets,
file groups, participants, devices, and variables, previewing selections,
and exporting annotated reproducible R scripts.
- Added a documented Posit Connect deployment entry point and dependency
manifest workflow.
glcdp 0.9.1
- Corrected the package logo, removed its exterior background for transparent
display, and refreshed the pkgdown logo and favicon assets.
glcdp 0.9.0
- Initial package implementation for registry discovery, metadata inspection,
selective downloads, Git LFS retrieval, and metadata-driven data import.
- Added a pkgdown website and workflow vignettes covering discovery, metadata
inspection, selective import, collection, and reproducible downloads.
glc_read() now reports file-level progress by default in interactive
sessions; set progress = FALSE to suppress it.
- Filtered
glc_read() calls now use datetime source columns internally
without retaining them unless the filters explicitly select them.
- LightLogR-standardized
glc_collect() output now maps dataset ids to Id,
participant ids to participant_Id, and removes internal .glc_* columns.
- Fixed remote loading of small Git blobs and metadata searches through nested
data-frame fields, resolving the metadata examples in the vignettes.
glc_search_metadata() can now search metadata values, field paths, or both
with the new search_in argument.
- Unauthenticated ordinary Git file transfers now use immutable raw-content
URLs, preventing per-file GitHub API rate limits during reads and downloads.
- Summaries of local subsets now distinguish available from declared datasets,
file groups, and files;
glc_read(dataset_id = "all") skips files that are
intentionally absent from a local subset and reports the discrepancy.